Download data

Created on Sat May 1 15:12:38 2019
@author: Semeon Risom
@purpose: Hub for running processing and analysis.

imports

[ ]:
import os, sys; sys.path.append(os.path.abspath('../../../'))
from imhr.download import Download

raw data (UTWeb)

[ ]:
#----login
home = 'panel.utweb.utexas.edu' #hostname
user = "utw10623" #username
pwd = "mdlcla" #password
#----download partial data
filetype = '.csv'
s = '/home/utweb/utw10623/public_html/a/r33/src/csv/data/subject/part'
d = '/Users/mdl-admin/Desktop/r33/utweb/part'
log, start, end, now = Download.SFTP(source=s, destination=d, hostname=home, username=user, password=pwd, filetype=filetype)
#----download full data
filetype = '.csv'
s = '/home/utweb/utw10623/public_html/a/r33/src/csv/data/subject'
d = '/Users/mdl-admin/Desktop/r33/utweb/full'
log, start, end, now = Download.SFTP(source=s, destination=d, hostname=home, username=user, password=pwd, filetype=filetype)

REDCap

[ ]:
#----login, paths
d = '/Users/mdl-admin/Desktop/r33/redcap'
redcap_token = 'D19832E1ACE0B3A502F2E41E05057C20'
redcap_url = 'https://redcap.prc.utexas.edu/redcap/api/'
content = 'report'
report_id = '4717'
#----export
# completed: report, participantList, metadata, project
log, start, end, now = download.REDCap(path=d, token=redcap_token, url=redcap_url, content=content, report_id=report_id)

box

[ ]: